Package: rworkflows 1.0.1

Brian Schilder

rworkflows: Test, Document, Containerise, and Deploy R Packages

Reproducibility is essential to the progress of research, yet achieving it remains elusive even in computational fields. Continuous Integration (CI) platforms offer a powerful way to launch automated workflows to check and document code, but often require considerable time, effort, and technical expertise to setup. We therefore developed the rworkflows suite to make robust CI workflows easy and freely accessible to all R package developers. rworkflows consists of 1) a CRAN/Bioconductor-compatible R package template, 2) an R package to quickly implement a standardised workflow, and 3) a centrally maintained GitHub Action.

Authors:Brian Schilder [aut, cre], Alan Murphy [aut, ctb], Nathan Skene [aut]

rworkflows_1.0.1.tar.gz
rworkflows_1.0.1.zip(r-4.5)rworkflows_1.0.1.zip(r-4.4)rworkflows_1.0.1.zip(r-4.3)
rworkflows_1.0.1.tgz(r-4.4-any)rworkflows_1.0.1.tgz(r-4.3-any)
rworkflows_1.0.1.tar.gz(r-4.5-noble)rworkflows_1.0.1.tar.gz(r-4.4-noble)
rworkflows_1.0.1.tgz(r-4.4-emscripten)rworkflows_1.0.1.tgz(r-4.3-emscripten)
rworkflows.pdf |rworkflows.html✨
rworkflows/json (API)
NEWS

Peer review:

Bug tracker:https://github.com/neurogenomics/rworkflows/issues

On CRAN:

bioconductorcontainerscontinuous-integrationdockerdockerhubgithub-actionsreproducibilityworkflows

22 exports 71 stars 3.86 score 60 dependencies 4 scripts 429 downloads

Last updated 29 days agofrom:3013968036. Checks:OK: 1 ERROR: 6. Indexed: yes.

Exports:bioc_r_versionsconda_exportconstruct_authorsconstruct_conda_ymlconstruct_contconstruct_runnersdt_to_descfill_descriptionget_descriptionget_hexinfer_biocviewsinfer_depsinfer_docker_orgis_ghause_badgesuse_codespaceuse_dockerfileuse_issue_templateuse_readmeuse_vignette_dockeruse_vignette_getstarteduse_workflow

Dependencies:askpassbadgerBiocManagerclicliprcolorspacecrayoncredentialscurldata.tabledescdigestdlstatsfansifarverfsgertggplot2ghgitcredsgluegtableherehttr2iniisobandjsonlitelabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmeopensslpillarpkgconfigpurrrR6rappdirsRColorBrewerrenvrlangrprojrootrstudioapirvcheckscalessystibbleusethisutf8vctrsviridisLitewhiskerwithryamlyulab.utilszip